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植物种质基因组学与计算生物学专题组
论文发表

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文章来源:  |  更新时间:2023-08-11  |  作者:  |  浏览次数:  |  【打印】 【关闭

 
 
1. Jin X, Du H, Zhu C, Wan H, Liu F, Ruan J*, Mower JP*, Zhu A*. Haplotype-resolved genomes of wild octoploid progenitors illuminate genomic diversifications from wild relatives to cultivated strawberry. 2023, Nature Plants. in press. (https://doi.org/10.1038/s41477-023-01473-2)

2. Fan W#, He ZS#, Zhe M, Feng JQ, Zhang L, Huang Y, Liu F, Huang JL, Ya JD, Zhang SB, Yang JB*, Zhu A*, Li DZ*. High-quality Cymbidium mannii genome and multifaceted regulation of crassulacean acid metabolism in epiphytes. 2023, Plant Communications. in press. (https://doi.org/10.1016/j.xplc.2023.100564)

3. Fan W#Liu F#, Jia Q, Du H, Chen W, Ruan J, Lei J, Li DL*, Mower JP*, Zhu A* (2022) Fragaria mitogenomes evolve rapidly in structure but slowly in sequence and incur frequent multinucleotide mutations mediated by micro‐inversions. New Phytologist 236: 745-759.  (https://doi.org/10.1111/nph.18334)

4. Li Z#Zhu A#, Song Q, Chen HY, Harmon FG, Chen ZJ* (2020) Temporal regulation of metabolome and proteome in photosynthetic and photorespiratory pathways contributes to maize heterosis. The Plant Cell 32(2):3706-3722  (https://doi.org/10.1105/tpc.20.00320)

5. Liu F#Fan W#, Yang JB, Xiang CL, Mower JP, Li DL*, Zhu A* (2020) Episodic and GC-biased bursts of intragenomic and interspecific synonymous divergence in Ajugoideae (Lamiaceae) mitogenomes. New Phytologist 228: 1107-1114. (https://doi.org/10.1111/nph.16753)

6. Guo W#Zhu A#Fan W, Robert P Adams RP, Mower JP* (2020) Extensive Shifts from Cis- to Trans-splicing of Gymnosperm Mitochondrial Introns. Molecular Biology and Evolution 37(6):1615-1620. (https://doi.org/10.1093/molbev/msaa029)

7. Fan W, Guo W, L Funk L, Mower JP*,  Zhu A* (2019) Complete loss of RNA editing from the plastid genome and most highly expressed mitochondrial genes of Welwitschia mirabilisScience China Life Sciences 62 (4), 498-506. (https://doi.org/10.1007/s11427-018-9450-1)

8. Tao NG*, Chen Y, Wu Y, Wang X, Li L, Zhu A* (2019) The terpene limonene induced the green mold of citrus fruit through regulation of reactive oxygen species (ROS) homeostasis in Penicillium digitatum spores. Food Chemistry 277, 414-422 https://doi.org/10.1016/j.foodchem.2018.10.142

9. Zhu A#Fan W#, Adams RP, JP Mower JP*. (2018) Phylogenomic evidence for ancient recombination between plastid genomes of the Cupressus-Juniperus-Xanthocyparis complex (Cupressaceae). BMC Evolutionary Biology 18(1):137

10. Zhu A, Guo W, Gupta S, Mower JP* (2016) Evolution dynamics of the plastid inverted repeat: the effects of the expansion, contraction, and loss on substitution rates. New Phytologist 209(4), 1747-1756

11. Zhu A, Guo W, Jain K, Mower JP* (2014) Unprecedented heterogeneity in the synonymous substitution rate within a plant genome. Molecular Biology and Evolution 31 (5): 1228-1236


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