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保护园艺学与种质创新专题组
团队成员

张仁纲

文章来源:  |  更新时间:2022-11-08  |  作者:  |  浏览次数:  |  【打印】 【关闭

 

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张仁纲,硕士,保护园艺学与种质创新专题组

E-mail: zhangrengang@mail.kib.ac.cn

个人主页:zhangrengang · GitHub(3) Ren-Gang Zhang (researchgate.net) 

研究方向:生物信息学、演化基因组学

 

学习工作经历:

2007.92011.7,北京化工大学,生物工程专业,学士

2011.92014.7,北京化工大学,化学工程与技术专业,硕士,从事深层地下微生物多样性及细菌系统分类等研究

2014.72022.7,源宜(山东)基因科技股份有限公司,历任实验室主管、生物信息主管、生信总监等,后期主要从事植物基因组学相关研究

2022.11–今,中国科学院昆明植物研究所,保护园艺学与种质创新专题组,助理研究员(项目聘用)

  

发表论文:

Jia Kai-Hua#, Wang Zhao-Xuan#, Wang Longxin#, Li Guang-Yuan, Zhang Wei, Wang Xiao-Ling, Xu Fangji, Jiao Si-Qian, Zhou Shan-Shan, Liu Hui, Ma Yong-Peng, Bi Guiqi, Zhao Wei, El-Kassaby Yousry A., Porth Ilga, Li Guowei*, Zhang Ren-Gang*, Mao Jian-Feng*. SubPhaser: a robust allopolyploids subgenome phasing method based on subgenome-specific k-mer. New Phytologist, 2022, 235 (2): 801–809

 

Zhang Ren-Gang#, Li Guang-Yuan#, Wang Xiao-Ling, Dainat Jacques, Wang Zhao-Xuan, Ou Shujun*, Ma Yongpeng*. TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes. Horticulture Research, 2022, 9: uhac017

 

An Xinmin#,*, Gao Kai#, Chen Zhong#, Li Juan, Yang Xiong, Yang Xiaoyu, Zhou Jing, Guo Ting, Zhao Tianyun, Huang Sai, Miao Deyu, Khan Wasif Ullah, Rao Pian, Ye Meixia, Lei Bingqi, Liao Weihua, Wang Jia, Ji Lexiang, Li Ying, Guo Bin, Mustafa Nada Siddig, Li Shanwen, Yun Quanzheng, Keller Stephen R., Mao Jian-Feng*, Zhang Rengang*, Strauss Steven H*. High quality haplotype-resolved genome assemblies of Populus tomentosa Carr., a stabilized interspecific hybrid species that is widespread in Asia [J]. Molecular Ecology Resources, 2021, 22(2), 786–802

 

Jia Kai-Hua#, Liu Hui#, Zhang Ren-Gang#, Xu Jie, Zhou Shan-Shan, Jiao Si-Qian, Yan Xue-Mei, Tian Xue-Chan, Shi Tian-Le, Luo Hang, Li Zhi-Chao, Bao Yu-Tao, Nie Shuai, Guo Jing-Fang, Porth Ilga, El-Kassaby Yousry, Wang Xiao-Ru, Chen Charles, van de Peer Yves, Zhao Wei*, Mao Jian-Feng*. Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome [J]. Horticulture Research, 2021, 8, 177

 

Cheng Shi-Ping#, Jia Kai-Hua#, Liu Hui#, Zhang Ren-Gang#, Li Zhi-Chao, Zhou Shan-Shan, Shi Tian-Le, Ma Ai-Chu, Yu Cong-Wen, Gao Chan, Cao Guang-Lei, Zhao Wei, Nie Shuai, Guo Jing-Fang, Jiao Si-Qian, Tian Xue-Chan, Yan Xue-Mei, Bao Yu-Tao, Yun Quan-Zheng, Porth Ilga, El-Kassaby Yousry, Wang Xiao-Ru, Li Zhen, van de Peer Yves*, Mao Jian-Feng*. Haplotype-resolved genome assembly and allele specific gene expression of cultivated ginger [J]. Horticulture Research, 2021, 8, 188

 

Ma Yong-Peng#,*, Wariss Hafiz Muhammad#, Liao Rong-Li#, Zhang Ren-Gang#, Yun Quan-Zheng, Olmstead Richard G., Chau John H., Milne Richard I.*, Van de Peer Yves*, Sun Wei-Bang*. Genome-wide analysis of butterfly bush (Buddleja alternifolia) in three uplands provides insights into biogeography, demography and speciation [J]. New Phytologist, 2021, 232(3), 1463–1476

 

Chen Jia-hui#,*, Huang Yuan#, Brachi Benjamin#, Yun Quan-zheng#, Zhang Wei, Lu Wei, Li Hong-na, Li Wen-qing, Sun Xu-dong, Wang Guang-yan, He Jun, Zhou Zhuo, Chen Kai-yun, Ji Yun-heng, Shi Ming-ming, Sun Wen-guang, Yang Yong-ping*, Zhang Ren-gang#, Abbott Richard J.*, Sun Hang*. Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot [J]. Nature Communications, 2019, 10 (1): 5230

 

Zhang Ren-Gang#, Tan Xu, Zhao Xing-Min, Deng Jian, Lv Jie*. Moheibacter sediminis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from sediment, and emended descriptions of Empedobacter brevis, Wautersiella falsenii and Weeksella virosa [J]. Int J Syst Evol Microbiol, 2014, 64 (Pt5): 1481–1487

 

Zhang Ren-Gang#, Tan Xu#, Liang Ye, Meng Tian-Yi, Liang Hui-Zhen, Lv Jie*. Description of Chishuiella changwenlii gen. nov., sp. nov., isolated from freshwater, and transfer of [Wautersiella] falsenii to the genus Empedobacter as Empedobacter falsenii comb. nov. [J]. Int J Syst Evol Microbiol, 2014, 64 (Pt8): 2723–2728


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