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植物多样性与系统发育基因组学专题组
发表论文

2021年发表论文目录

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1.   
Xu Z-C, Liu J-X, Li D-Z*. 2021. Gigantochloa glabrata (Poaceae, Bambusoideae), a new bamboo species from Yunnan, China. PhytoKeys 171: 37-45.

2.   Ma P-F#, Liu Y-L#, Jin G-H, Liu J-X, Wu H, He J, Guo Z-H, Li D-Z*. 2021. The Pharus latifolius genome bridges the gap of early grass evolution. Plant Cell 33: 846-864.

3.   Yu Y, Li H-T, Wu Y-H*, Li D-Z*. 2021. Correlation analysis reveals an important role of GC content in accumulation of deletion mutations in the coding region of angiosperm plastomes. Journal of Molecular Evolution 89: 73-80.

4.   Guo C, Ma P-F, Yang G-Q, Ye X-Y, Guo Y, Liu J-X, Liu Y-L, Eaton DAR, Guo Z-H*, Li D-Z*. 2021. Parallel ddRAD and genome skimming analyses reveal a radiative and reticulate evolutionary history of the temperate bamboos. Systematic Biology 70(4): 756-773.

5.   Liu L-M, Du X-Y, Guo C, Li D-Z*. 2021. Resolving robust phylogenetic relationships of core Brassicaceae using genome skimming data. Journal of Systematics and Evolution 59(3): 442-453.

6.   Du X-Y#, Lu J-M#*, Zhang L-B, Wen J, Kuo L-Y, Mynssen CM, Schneider H*, Li D-Z*. 2021. Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic. Cladistics 37(5): 518-539.

7.   Fu C-N, Mo Z-Q, Yang J-B, Cai J, Ye L-J, Zou J-Y, Qin H-T, Zheng W, Hollingsworth PM*, Li D-Z*, Gao L-M*. 2022. Testing genome skimming for species discrimination in the large and taxonomically difficult genus RhododendronMolecular Ecology Resources 22(1):404-414.

8.   Li H-T#, Luo Y#, Gan L#, Ma P-F#, Gao L-M#, Yang J-B#, Cai J#, Gitzendanner MA, Fritsch PW, Zhang T, Jin J-J, Zeng C-X, Wang H, Yu W-B, Zhang R, van der Bank M, Olmstead RG, Hollingsworth PM, Chase MW, Soltis DE, Soltis PS, Yi T-S*, Li D-Z*. 2021. Plastid phylogenomic insights into relationships of all flowering plant families. BMC Biology 19: 232.

9.   He Z-S, Zhu A, Yang J-B, Fan W*, Li D-Z*. 2021. Organelle genomes and transcriptomes of Nymphaea reveal the interplay between intron splicing and RNA editing. International Journal of Molecular Sciences 22(18): 9842.

10.  Liang H, Zhao Y-H, Rafferty NE*, Ren Z-X, Zhong L, Li H-D, Li D-Z, Wang H*. 2021. Evolutionary and ecological factors structure a plantbumblebee network in a biodiversity hotspot, the HimalayaHengduan Mountains. Functional Ecology 35(11): 2523-2535.

11.  Li X, Yang J-B, Wang H, Song Y, Corlett RT, Yao X, Li D-Z*, Yu W-B*. 2021. Plastid NDH pseudogenization and gene loss in a recently derived lineage from the largest hemiparasitic plant genus Pedicularis (Orobanchaceae). Plant and Cell Physiology 62(6): 971-984.

12.  Stull GW#, Qu X-J#, Parins-Fukuchi C, Yang Y-Y, Yang J-B, Yang Z-Y, Hu Y, Ma H, Soltis PS, Soltis DE, Li D-Z*, Smith SA*, Yi T-S*. 2021. Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms. Nature Plants 7: 1015-1025.

13.  Wambulwa MC, Milne R, Wu Z-Y, Spicer RA, Provan J, Luo Y-H, Zhu G-F, Wang W-T, Wang H, Gao L-M, Li D-Z*, Liu J*. 2021. Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives. Ecology and Evolution 11(16): 10794-10812.

14.  Wu H, Ma P-F, Li H-T, Hu G-X, Li D-Z*. 2021. Comparative plastomic analysis and insights into the phylogeny of Salvia (Lamiaceae). Plant Diversity 43(1): 15-26.

15.  Xu W, Yang T, Sun C, Wang Z, Han B, Wu S, Yu A, Chapman MA, Muraguri S, Tan Q, Wang W, Bao Z, Liu A*, Li D-Z*. 2021. Genomic insights into the origin, domestication and genetic basis of agronomic traits of castor bean. Genome Biology 22: 113.

16.  Ye J-W, Li D-Z*. 2021. Distinct late Pleistocene subtropical‑tropical divergence revealed by fifteen low‑copy nuclear genes in a dominant species in South‑East China. Scientific Reports 11: 4147.

17.  Ye L-J, Mӧller M, Luo Y-H, Zou J-Y, Zheng W, Wang Y-H, Liu J, Zhu A-D, Hu J-Y, Li D-Z*, Gao L-M*. 2021. Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex. BMC Plant Biology 21:204.

18.  Ye X-Y, Ma P-F, Guo C, Li D-Z*. 2021. Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution. Journal of Systematics and Evolution 59(6): 1183-1197.

19.  Ye X-Y, Zhang Y-X, Li D-Z*. 2021. Two new species of Yushania (Poaceae: Bambusoideae) from South China, with a taxonomic revision of related species. Plant Diversity 43(6): 492-501.

20.  Zhao T, Zuo Z-Y, Ebihara A, Nakato N, Soejima A, Li D-Z*, Wen J*, Lu J-M*. 2021. Adiantum japonicum, a new species of the Adiantum pedatum complex (Pteridaceae) from Japan. Phytotaxa 525(1): 1-14.

21.  Zhao Y-H, Memmott J, Vaughan IP, Li H-D, Ren Z-X, Lázaro A, Zhou W, Xu X, Wang W-J, Liang H, Li D-Z, Wang H*. 2021. The impact of a native dominant plant, Euphorbia jolkinii, on plantflower visitor networks and pollen deposition on stigmas of co-flowering species in subalpine meadows of Shangri-La, SW China. Journal of Ecology 109: 2107-2120.

22.  Zhao Y-H*, Zhang X-M, Li D-Z*. 2021. Development of the petaloid bracts of a paleoherb species, Saururus chinensisPloS ONE 16(9): e0255679.

23.  Zhong M-C, Jiang X-D, Yang G-Q, Cui W-H, Suo Z-Q, Wang W-J, Sun Y-B, Wang D, Cheng X-C, Li X-M, Dong X, Tang K-X, Li D-Z*, Hu J-Y*. 2021. Rose without prickle: genomic insights linked to moisture adaptation. National Science Review 8(12): nwb092.

24.  李德铢*, 蔡杰贺伟杨湘云. 2021. 野生生物种质资源保护的进展和未来设想中国科学院院刊 36(4): 409-416.

25.  Jin G#, Ma P-F#, Wu X, Gu L, Long M*, Zhang C*, Li D-Z*. 2021. New genes interacted with recent whole genome duplicates in the fast stem growth of bamboos. Molecular Biology and Evolution 38(12): 5752-5768.

26.  Zhao Y-H, Lázaro A, Li H-D, Tao Z-B, Liang H, Zhou W, Ren Z-X, Xu K, Li D-Z, Wang H*. 2022. Morphological trait-matching in plantHymenoptera and plantDiptera mutualisms across an elevational gradient. Journal of Animal Ecology 91(1): 196-209.

27.  Jin G-H, Zhou Y-L, Yang H, Hu Y-T, Shi Y, Li L, Siddique A-N, Liu C-N, Zhu A-D, Zhang C-J*, Li D-Z*. 2021. Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome. Journal of Systematica and Evolution 56(2): 341-351.

28.  邓云飞,张力,李德铢 译著. 2021. 国际藻类、菌物和植物命名法规(深圳法规)2018. 科学出版社,北京


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